Gene

Cell type

Neuroscience

Biology

Retina

Ophthalmology

Aqueous humor

Glaucoma

Immunology

Genetics

Transcriptome

Bioinformatics

Intraocular pressure

Retinal ganglion cell

Medicine

Cell

Disease

Pathogenesis

Gene expression

Pathology

Macaque

Proceedings of the National Academy of Sciences

Increased intraocular pressure (IOP) represents a major risk factor for glaucoma, a prevalent eye disease characterized by death of retinal ganglion cells; lowering IOP is the only proven treatment strategy to delay disease progression. The main determinant of IOP is the equilibrium between production and drainage of aqueous humor, with compromised drainage generally viewed as the primary contributor to dangerous IOP elevations. Drainage occurs through two pathways in the anterior segment of the eye called conventional and uveoscleral. To gain insights into the cell types that comprise these pathways, we used high-throughput single-cell RNA sequencing (scRNAseq). From ∼24,000 single-cell transcriptomes, we identified 19 cell types with molecular markers for each and used histological methods to localize each type. We then performed similar analyses on four organisms used for experimental studies of IOP dynamics and glaucoma: cynomolgus macaque ( Macaca fascicularis ), rhesus macaque ( Macaca mulatta ), pig ( Sus scrofa ), and mouse ( Mus musculus ). Many human cell types had counterparts in these models, but differences in cell types and gene expression were evident. Finally, we identified the cell types that express genes implicated in glaucoma in all five species. Together, our results provide foundations for investigating the pathogenesis of glaucoma and for using model systems to assess mechanisms and potential interventions.

Cell atlas of aqueous humor outflow pathways in eyes of humans and four model species provides insight into glaucoma pathogenesis