Original paper
CLIP-seq analysis of multi-mapped reads discovers novel functional RNA regulatory sites in the human transcriptome
Abstract
Crosslinking or RNA immunoprecipitation followed by sequencing (CLIP-seq or RIP-seq) allows transcriptome-wide discovery of RNA regulatory sites. As CLIP-seq/RIP-seq reads are short, existing computational tools focus on uniquely mapped reads, while reads mapped to multiple loci are discarded. We present CLAM (CLIP-seq Analysis of Multi-mapped reads). CLAM uses an expectation–maximization algorithm to assign multi-mapped reads and calls peaks...
Paper Details
Title
CLIP-seq analysis of multi-mapped reads discovers novel functional RNA regulatory sites in the human transcriptome
Published Date
Aug 9, 2017
Journal
Volume
45
Issue
16
Pages
9260 - 9271
Citation AnalysisPro
You’ll need to upgrade your plan to Pro
Looking to understand the true influence of a researcher’s work across journals & affiliations?
- Scinapse’s Top 10 Citation Journals & Affiliations graph reveals the quality and authenticity of citations received by a paper.
- Discover whether citations have been inflated due to self-citations, or if citations include institutional bias.
Notes
History