Original paper
Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown
Abstract
High-throughput sequencing of mRNA (RNA-seq) has become the standard method for measuring and comparing the levels of gene expression in a wide variety of species and conditions. RNA-seq experiments generate very large, complex data sets that demand fast, accurate and flexible software to reduce the raw read data to comprehensible results. HISAT (hierarchical indexing for spliced alignment of transcripts), StringTie and Ballgown are free,...
Paper Details
Title
Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown
Published Date
Aug 11, 2016
Journal
Volume
11
Issue
9
Pages
1650 - 1667
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Notes
History