Neuroscience

Functional connectivity

Connectome

Scripting language

Biology

Neuroanatomy

Tracing

Artificial intelligence

Programming language

Neuroinformatics

Data science

Toolbox

Connectomics

Visualization

Computer science

Nature Methods

SNT is an end-to-end framework for neuronal morphometry and whole-brain connectomics that supports tracing, proof-editing, visualization, quantification and modeling of neuroanatomy. With an open architecture, a large user base, community-based documentation, support for complex imagery and several model organisms, SNT is a flexible resource for the broad neuroscience community. SNT is both a desktop application and multi-language scripting library, and it is available through the Fiji distribution of ImageJ. SNT is a toolbox neuronal morphometry and connectomics and provides various analysis, visualization, quantification and modeling tools.

SNT: a unifying toolbox for quantification of neuronal anatomy