TurboFold II: RNA structural alignment and secondary structure prediction informed by multiple homologs

Volume: 45, Issue: 20, Pages: 11570 - 11581
Published: Sep 28, 2017
Abstract
This paper presents TurboFold II, an extension of the TurboFold algorithm for predicting secondary structures for multiple RNA homologs. TurboFold II augments the structure prediction capabilities of TurboFold by additionally providing multiple sequence alignments. Probabilities for alignment of nucleotide positions between all pairs of input sequences are iteratively estimated in TurboFold II by incorporating information from both the sequence...
Paper Details
Title
TurboFold II: RNA structural alignment and secondary structure prediction informed by multiple homologs
Published Date
Sep 28, 2017
Volume
45
Issue
20
Pages
11570 - 11581
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