Linda L. Kinkel
University of Minnesota
Biological pest controlMicrobiomeHorticultureBiotechnologySoil waterSoil microbiologyEcologyPopulation densityPhyllospherePathogenStreptomyces scabiesStreptomycesPopulationBacteriaPlant communitySpecies richnessBotanyAgronomyMicrobial ecologyMicrobial population biologyRhizosphereBiologyMicrobiologyCompetition (biology)
146Publications
43H-index
4,377Citations
Publications 148
Newest
#1James E. Crants (UMN: University of Minnesota)H-Index: 3
#2Linda L. Kinkel (UMN: University of Minnesota)H-Index: 43
Last. Carl J. Rosen (UMN: University of Minnesota)H-Index: 42
view all 6 authors...
In North America, potato early dying is often controlled using soil fumigants. Fumigants confer benefits on plant health but also impact soil microbial activity, including nitrogen (N) cycling. The purpose of this study was to evaluate the effects of two soil fumigants, chloropicrin and metam sodium, on potato crop yield, N uptake, and N use efficiency (NUE), as well as soilborne pathogens, soil microbial respiration rates and soil concentrations of NH4+-N and NO3−-N. We established a field stud...
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#1Matthew J. Michalska-Smith (UMN: University of Minnesota)H-Index: 6
#2Zewei Song (UMN: University of Minnesota)H-Index: 9
Last. Linda L. Kinkel (UMN: University of Minnesota)H-Index: 43
view all 9 authors...
Endophytes often have dramatic effects on their host plants. Characterizing the relationships among members of these communities has focused on identifying the effects of single microbes on their host, but has generally overlooked interactions among the myriad microbes in natural communities as well as potential higher-order interactions. Network analyses offer a powerful means for characterizing patterns of interaction among microbial members of the phytobiome that may be crucial to mediating i...
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#1Sarah C. Castle (ARS: Agricultural Research Service)H-Index: 11
#2Deborah A. Samac (ARS: Agricultural Research Service)H-Index: 40
Last. Linda L. Kinkel (UMN: University of Minnesota)H-Index: 43
view all 7 authors...
Soil microbiomes and their interactions with crop plants are important drivers of agricultural health and productivity. Our objective was to examine short-term responses of soil microbiota to agricultural management (i.e. cover cropping and nitrogen fertilization). Following three years of cropping, soil samples were collected from replicated field plots at two southern Minnesota field sites (Lamberton and Waseca). We used amplicon-based gene sequencing (ITS2 and 16S rRNA V4) to investigate shor...
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#1Pajau Vangay (LBNL: Lawrence Berkeley National Laboratory)H-Index: 17
#2Josephine Burgin (EMBL-EBI: European Bioinformatics Institute)H-Index: 3
Last. Emiley A. Eloe-Fadrosh (LBNL: Lawrence Berkeley National Laboratory)H-Index: 28
view all 42 authors...
Volume 6, no. 1, e01194-20, 2021, [https://doi.org/10.1128/mSystems.01194-20][1]. The article byline and affiliation line should read as given in this correction. [1]: /lookup/doi/10.1128/mSystems.01194-20
Source
#1Mayank Kohli (UMN: University of Minnesota)H-Index: 2
#2Jeremiah A. Henning (USA: University of South Alabama)H-Index: 9
Last. Eric W. Seabloom (UMN: University of Minnesota)H-Index: 67
view all 5 authors...
Plant diversity and plant-consumer/pathogen interactions likely interact to influence ecosystem carbon fluxes but experimental evidence is scarce. We examined how experimental removal of foliar fungi, soil fungi and arthropods from experimental prairies planted with 1, 4 or 16 plant species affected instantaneous rates of carbon uptake (GPP), ecosystem respiration (Re ) and net ecosystem exchange (NEE). Increasing plant diversity increased plant biomass, GPP and Re , but NEE remained unchanged. ...
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#1Pajau Vangay (LBNL: Lawrence Berkeley National Laboratory)H-Index: 17
#2Josephine BurginH-Index: 3
Last. Danielle Christianson (LBNL: Lawrence Berkeley National Laboratory)H-Index: 4
view all 41 authors...
Microbiome samples are inherently defined by the environment in which they are found. Therefore, data that provide context and enable interpretation of measurements produced from biological samples, often referred to as metadata, are critical. Important contributions have been made in the development of community-driven metadata standards; however, these standards have not been uniformly embraced by the microbiome research community. To understand how these standards are being adopted, or the ba...
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#1Matthew RyanH-Index: 1
Last. Angela SessitschH-Index: 78
view all 26 authors...
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#1M.J. Ryan (CABI)H-Index: 15
#2Michael SchloterH-Index: 89
Last. Angela Sessitsch (Austrian Institute of Technology)H-Index: 78
view all 26 authors...
The microbiome research field is rapidly evolving, but the required biobanking infrastructure is currently fragmented and not prepared for the biobanking of microbiomes. The rapid advancement of technologies requires an urgent assessment of how biobanks can underpin research by preserving microbiome samples and their functional potential.
Source
#1Jeremiah A. Henning (USA: University of South Alabama)H-Index: 9
#2Linda L. Kinkel (UMN: University of Minnesota)H-Index: 43
Last. Elizabeth T. Borer (UMN: University of Minnesota)H-Index: 57
view all 6 authors...
Foliar fungal endophytes are ubiquitous plant symbionts that can affect plant growth and reproduction via their roles in pathogen and stress tolerance, as well as plant hormonal signaling. Despite their importance, we have a limited understanding of how foliar fungal endophytes respond to varying environmental conditions such as nutrient inputs. The responses of foliar fungal endophyte communities to increased nutrient deposition may be mediated by the simultaneous effects on within-host competi...
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#1M.J. Ryan (CABI)H-Index: 15
#2Michael SchloterH-Index: 89
Last. Angela Sessitsch (Austrian Institute of Technology)H-Index: 78
view all 8 authors...
High-quality microbiome research relies on the integrity, management and quality of supporting data. Currently biobanks and culture collections have different formats and approaches to data management. This necessitates a standard data format to underpin research, particularly in line with the FAIR data standards of findability, accessibility, interoperability and reusability. We address the importance of a unified, coordinated approach that ensures compatibility of data between that needed by b...
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