Gene

Quantum mechanics

Pure mathematics

Operating system

Eigenvalues and eigenvectors

Hilbert space

Biochemistry

Computer science

Observable

Spectral geometry

Spectrum (functional analysis)

Physics

Nonlinear system

Mathematics

Dynamical system (definition)

Eigenfunction

Attractor

Transcription factor

Mathematical analysis

Geometry

Dynamical systems theory

Repressor

Chemistry

Operator (biology)

Space (punctuation)

Journal of Nonlinear Science

We examine spectral operator-theoretic properties of linear and nonlinear dynamical systems with globally stable attractors. Using the Kato decomposition, we develop a spectral expansion for general linear autonomous dynamical systems with analytic observables and define the notion of generalized eigenfunctions of the associated Koopman operator. We interpret stable, unstable and center subspaces in terms of zero-level sets of generalized eigenfunctions. We then utilize conjugacy properties of Koopman eigenfunctions and the new notion of open eigenfunctions—defined on subsets of state space—to extend these results to nonlinear dynamical systems with an equilibrium. We provide a characterization of (global) center manifolds, center-stable, and center-unstable manifolds in terms of joint zero-level sets of families of Koopman operator eigenfunctions associated with the nonlinear system. After defining a new class of Hilbert spaces, that capture the on- and off-attractor properties of dissipative dynamics, and introducing the concept of modulated Fock spaces, we develop spectral expansions for a class of dynamical systems possessing globally stable limit cycles and limit tori, with observables that are square-integrable in on-attractor variables and analytic in off-attractor variables. We discuss definitions of stable, unstable, and global center manifolds in such nonlinear systems with (quasi)-periodic attractors in terms of zero-level sets of Koopman operator eigenfunctions. We define the notion of isostables for a general class of nonlinear systems. In contrast with the systems that have discrete Koopman operator spectrum, we provide a simple example of a measure-preserving system that is not chaotic but has continuous spectrum, and discuss experimental observations of spectrum on such systems. We also provide a brief characterization of the data types corresponding to the obtained theoretical results and define the coherent principal dimension for a class of datasets based on the lattice-type principal spectrum of the associated Koopman operator.

Spectrum of the Koopman Operator, Spectral Expansions in Functional Spaces, and State-Space Geometry