Parsing

World Wide Web

JavaScript

Computer science

Software

Database

Source code

MIT License

Dashboard

Documentation

Software engineering

Programming language

Python (programming language)

Extensibility

Bioinformatics

FQC is software that facilitates quality control of FASTQ files by carrying out a QC protocol using FastQC, parsing results, and aggregating quality metrics into an interactive dashboard designed to richly summarize individual sequencing runs. The dashboard groups samples in dropdowns for navigation among the data sets, utilizes human-readable configuration files to manipulate the pages and tabs, and is extensible with CSV data.FQC is implemented in Python 3 and Javascript, and is maintained under an MIT license. Documentation and source code is available at: https://github.com/pnnl/fqc .joseph.brown@pnnl.gov.

FQC Dashboard: integrates FastQC results into a web-based, interactive, and extensible FASTQ quality control tool