Fast and accurate short read alignment with Burrows–Wheeler transform
Abstract
Motivation: The enormous amount of short reads generated by the new DNA sequencing technologies call for the development of fast and accurate read alignment programs. A first generation of hash table-based methods has been developed, including MAQ, which is accurate, feature rich and fast enough to align short reads from a single individual. However, MAQ does not support gapped alignment for single-end reads, which makes it unsuitable for...
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Paper Details
Title
Fast and accurate short read alignment with Burrows–Wheeler transform
DOI
Published Date
Jul 1, 2009
Journal
Volume
25
Issue
14
Pages
1754 - 1760
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