metaSNV v2: detection of SNVs and subspecies in prokaryotic metagenomes
Abstract
Taxonomic analysis of microbial communities is well supported at the level of species and strains. However, species can contain significant phenotypic diversity and strains are rarely widely shared across global populations. Stratifying the diversity between species and strains can identify 'subspecies', which are a useful intermediary. High-throughput identification and profiling of subspecies is not yet supported in the microbiome field. Here,...
Paper Details
Title
metaSNV v2: detection of SNVs and subspecies in prokaryotic metagenomes
Published Date
Nov 17, 2021
Journal
Volume
38
Issue
4
Pages
1162 - 1164
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