Classification and Visualization of Genotype x Phenotype Interactions in Biomass Sorghum

Published: Aug 9, 2021
Abstract
We introduce a simple approach to understanding the relationship between single nucleotide polymorphisms (SNPs), or groups of related SNPs, and the phenotypes they control. The pipeline involves training deep convolutional neural networks (CNNs) to differentiate between images of plants with reference and alternate versions of various SNPs, and then using visualization approaches to highlight what the classification networks key on. We...
Paper Details
Title
Classification and Visualization of Genotype x Phenotype Interactions in Biomass Sorghum
Published Date
Aug 9, 2021
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