VPF-Class: taxonomic assignment and host prediction of uncultivated viruses based on viral protein families
Abstract
Motivation Two key steps in the analysis of uncultured viruses recovered from metagenomes are the taxonomic classification of the viral sequences and the identification of putative host(s). Both steps rely mainly on the assignment of viral proteins to orthologs in cultivated viruses. Viral Protein Families (VPFs) can be used for the robust identification of new viral sequences in large metagenomics datasets. Despite the importance of VPF...
Paper Details
Title
VPF-Class: taxonomic assignment and host prediction of uncultivated viruses based on viral protein families
Published Date
Jan 20, 2021
Journal
Volume
37
Issue
13
Pages
1805 - 1813
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