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Infectious Disease Modelling

Since the emergence of the novel 2019 coronavirus pandemic in December 2019 (COVID-19), numerous modellers have used diverse techniques to assess the dynamics of transmission of the disease, predict its future course and determine the impact of different control measures. In this study, we conducted a global systematic literature review to summarize trends in the modelling techniques used for Covid-19 from January 1st , 2020 to November 30th , 2020. We further examined the accuracy and precision of predictions by comparing predicted and observed values for cumulative cases and deaths as well as uncertainties of these predictions. From an initial 4311 peer-reviewed articles and preprints found with our defined keywords, 242 were fully analysed. Most studies were done on Asian (78.93%) and European (59.09%) countries. Most of them used compartmental models (namely SIR and SEIR) (46.1%) and statistical models (growth models and time series) (31.8%) while few used artificial intelligence (6.7%), Bayesian approach (4.7%), Network models (2.3%) and Agent-based models (1.3%). For the number of cumulative cases, the ratio of the predicted over the observed values and the ratio of the amplitude of confidence interval (CI) or credibility interval (CrI) of predictions and the central value were on average larger than 1 indicating cases of inaccurate and imprecise predictions, and large variation across predictions. There was no clear difference among models used for these two ratios. In 75% of predictions that provided CI or CrI, observed values fall within the 95% CI or CrI of the cumulative cases predicted. Only 3.7% of the studies predicted the cumulative number of deaths. For 70% of the predictions, the ratio of predicted over observed cumulative deaths was less or close to 1. Also, the Bayesian model made predictions closer to reality than classical statistical models, although these differences are only suggestive due to the small number of predictions within our dataset (9 in total). In addition, we found a significa...

On the reliability of predictions on Covid-19 dynamics: A systematic and critical review of modelling techniques