Ben Busby
National Institutes of Health
RNA-SeqBinding siteWorld Wide WebGenomeMetagenomicsRefSeqWorkflowAnkyrinInformation retrievalData scienceAnnotationSoftwareObscurinComputer sciencePipeline (software)BiochemistryBioinformaticsComputational biologyMedicineBiology
59Publications
11H-index
319Citations
Publications 58
Newest
#2Medhat MahmoudH-Index: 9
Last. Fritz J. SedlazeckH-Index: 29
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In October 2020, 62 scientists from nine nations worked together remotely in the Second Baylor College of Medicine & DNAnexus hackathon, focusing on different related topics on Structural Variation, Pan-genomes, and SARS-CoV-2 related research. The overarching focus was to assess the current status of the field and identify the remaining challenges. Furthermore, how to combine the strengths of the different interests to drive research and method development forward. Over the four days, eight gro...
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#1Moamen M. Elmassry (TTU: Texas Tech University)H-Index: 6
#2Sunghwan Kim (NIH: National Institutes of Health)H-Index: 1
Last. Ben Busby (NIH: National Institutes of Health)H-Index: 11
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Characterizing the gut microbiota in terms of their capacity to interfere with drug metabolism is necessary to achieve drug efficacy and safety. Although examples of drug-microbiome interactions are well-documented, little has been reported about a computational pipeline for systematically identifying and characterizing bacterial enzymes that process particular classes of drugs. The goal of our study is to develop a computational approach that compiles drugs whose metabolism may be influenced by...
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#2Alejandro R. GenerH-Index: 2
Last. Ben BusbyH-Index: 11
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Viruses represent important test cases for data federation due to their genome size and the rapid increase in sequence data in publicly available databases. However, some consequences of previously decentralized (unfederated) data are lack of consensus or comparisons between feature annotations. Unifying or displaying alternative annotations should be a priority both for communities with robust entry representation and for nascent communities with burgeoning data sources. To this end, during thi...
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#1Medhat Mahmoud (BCM: Baylor College of Medicine)H-Index: 9
#2Alejandro R. GenerH-Index: 2
Last. Ben Busby (NIH: National Institutes of Health)H-Index: 11
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In October 2019, 46 scientists from around the world participated in the first National Center for Biotechnology Information (NCBI) Structural Variation (SV) Codeathon at Baylor College of Medicine. The charge of this first annual working session was to identify ongoing challenges around the topics of SV and graph genomes, and in response to design reliable methods to facilitate their study. Over three days, seven working groups each designed and developed new open-sourced methods to improve the...
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Last. Ben BusbyH-Index: 11
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#2Dreycey AlbinH-Index: 3
Last. Ben BusbyH-Index: 11
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#1Eric T. DawsonH-Index: 8
#2Gigon BaeH-Index: 1
Last. Ben BusbyH-Index: 11
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#2Venkat S. MalladiH-Index: 24
Last. Ben BusbyH-Index: 11
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#2Brianna ChrismanH-Index: 5
Last. Ben BusbyH-Index: 11
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Last. Ben BusbyH-Index: 11
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